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[*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc --version <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc --version -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -v <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -v [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -V <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -V -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/usr/pkg/lib conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/usr/pkg/lib conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include 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/Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/usr/pkg/lib conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/usr/pkg/lib conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c WARNING: [transform-gcc] passing unknown option 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/Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c -m32 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WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/usr/pkg/lib conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/usr/pkg/lib conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/usr/pkg/lib conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/usr/pkg/lib conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -c -pipe -O2 -no-cpp-precomp -isystem /usr/include conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/usr/pkg/lib conftest.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -o conftest -pipe -O2 -no-cpp-precomp -isystem /usr/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib conftest.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/mkdir -p . <.> /bin/mkdir -p -p . 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[*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c afetch_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c afetch_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c a2m.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c a2m.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c aligneval.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c aligneval.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c alignio.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c alignio.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c clustal.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c clustal.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c cluster.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c cluster.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c dayhoff.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c dayhoff.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c eps.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c eps.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c file.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c file.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c getopt.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c getopt.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c gki.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c gki.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c gsi.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c gsi.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c hsregex.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c hsregex.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c iupac.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c iupac.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c msa.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c msa.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c msf.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c msf.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c phylip.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c phylip.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c revcomp.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c revcomp.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c rk.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c rk.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c selex.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c selex.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c seqencode.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c seqencode.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c shuffle.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c shuffle.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sqerror.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sqerror.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sqio.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sqio.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c squidcore.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c squidcore.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sre_ctype.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sre_ctype.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sre_math.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sre_math.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sre_random.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sre_random.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sre_string.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sre_string.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c ssi.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c ssi.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c stack.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c stack.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c stockholm.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c stockholm.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c stopwatch.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c stopwatch.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c translate.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c translate.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c types.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c types.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c vectorops.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c vectorops.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c weight.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c weight.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o afetch afetch_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o afetch afetch_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c alistat_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c alistat_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o alistat alistat_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o alistat alistat_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c compalign_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c compalign_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o compalign compalign_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o compalign compalign_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c compstruct_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c compstruct_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o compstruct compstruct_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o compstruct compstruct_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c revcomp_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c revcomp_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o revcomp revcomp_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o revcomp revcomp_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c seqsplit_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c seqsplit_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o seqsplit seqsplit_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o seqsplit seqsplit_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c seqstat_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c seqstat_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o seqstat seqstat_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o seqstat seqstat_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sfetch_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sfetch_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o sfetch sfetch_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o sfetch sfetch_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c shuffle_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c shuffle_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o shuffle shuffle_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o shuffle shuffle_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sindex_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sindex_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o sindex sindex_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o sindex sindex_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sreformat_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c sreformat_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o sreformat sreformat_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o sreformat sreformat_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c translate_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c translate_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o translate translate_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o translate translate_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c weight_main.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -c weight_main.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o weight weight_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o weight weight_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_random.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o vectorops.o weight.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmalign.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmalign.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c alphabet.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c alphabet.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c core_algorithms.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c core_algorithms.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c debug.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c debug.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c display.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c display.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c emit.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c emit.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c emulation.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c emulation.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c fast_algorithms.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c fast_algorithms.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c histogram.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c histogram.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmio.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmio.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c mathsupport.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c mathsupport.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c masks.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c masks.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c misc.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c misc.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c modelmakers.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c modelmakers.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c plan7.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c plan7.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c plan9.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c plan9.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c postprob.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c postprob.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c prior.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c prior.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c pvm.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c pvm.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c threads.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c threads.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c tophits.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c tophits.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c trace.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c trace.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/usr/pkg/lib -L../squid -o hmmalign hmmalign.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -L../squid -o hmmalign hmmalign.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmbuild.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmbuild.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/usr/pkg/lib -L../squid -o hmmbuild hmmbuild.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -L../squid -o hmmbuild hmmbuild.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmcalibrate.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmcalibrate.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/usr/pkg/lib -L../squid -o hmmcalibrate hmmcalibrate.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -L../squid -o hmmcalibrate hmmcalibrate.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmconvert.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmconvert.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/usr/pkg/lib -L../squid -o hmmconvert hmmconvert.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -L../squid -o hmmconvert hmmconvert.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmemit.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmemit.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/usr/pkg/lib -L../squid -o hmmemit hmmemit.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -L../squid -o hmmemit hmmemit.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmfetch.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmfetch.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/usr/pkg/lib -L../squid -o hmmfetch hmmfetch.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -L../squid -o hmmfetch hmmfetch.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmindex.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmindex.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/usr/pkg/lib -L../squid -o hmmindex hmmindex.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -L../squid -o hmmindex hmmindex.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmpfam.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmpfam.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/usr/pkg/lib -L../squid -o hmmpfam hmmpfam.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -L../squid -o hmmpfam hmmpfam.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmsearch.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -c hmmsearch.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/usr/pkg/lib -L../squid -o hmmsearch hmmsearch.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -DHAVE_CONFIG_H -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -L../squid -o hmmsearch hmmsearch.o alphabet.o core_algorithms.o debug.o display.o emit.o emulation.o fast_algorithms.o histogram.o hmmio.o mathsupport.o masks.o misc.o modelmakers.o plan7.o plan9.o postprob.o prior.o pvm.o threads.o tophits.o trace.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c alignalign_test.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c alignalign_test.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o alignalign_test -L../squid -L../src alignalign_test.o -lhmmer -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o alignalign_test -L../squid -L../src alignalign_test.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lhmmer -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c evd_test.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c evd_test.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o evd_test -L../squid -L../src evd_test.o -lhmmer -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o evd_test -L../squid -L../src evd_test.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lhmmer -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c masks_test.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c masks_test.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o masks_test -L../squid -L../src masks_test.o -lhmmer -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o masks_test -L../squid -L../src masks_test.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lhmmer -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c parsingviterbi_test.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c parsingviterbi_test.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o parsingviterbi_test -L../squid -L../src parsingviterbi_test.o -lhmmer -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o parsingviterbi_test -L../squid -L../src parsingviterbi_test.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lhmmer -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c tophits_test.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c tophits_test.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o tophits_test -L../squid -L../src tophits_test.o -lhmmer -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o tophits_test -L../squid -L../src tophits_test.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lhmmer -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c trace_test.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c trace_test.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o trace_test -L../squid -L../src trace_test.o -lhmmer -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o trace_test -L../squid -L../src trace_test.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lhmmer -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c viterbi_exercise.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c viterbi_exercise.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o viterbi_exercise -L../squid -L../src viterbi_exercise.o -lhmmer -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o viterbi_exercise -L../squid -L../src viterbi_exercise.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lhmmer -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c weeviterbi_test.c WARNING: [transform-gcc] passing unknown option -no-cpp-precomp WARNING: [transform-gcc] passing unknown option -isystem <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -no-cpp-precomp -isystem /usr/include -DHAVE_CONFIG_H -I../squid -I../src -c weeviterbi_test.c -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc /Users/kristerw/pbulk/scratch/biology/hmmer/work/.wrapper/bin/gcc -pipe -O2 -L/usr/pkg/lib -DHAVE_CONFIG_H -o weeviterbi_test -L../squid -L../src weeviterbi_test.o -lhmmer -lsquid -lm <.> /Users/kristerw/pbulk/scratch/biology/hmmer/work/.gcc/bin/gcc -pipe -O2 -L/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/lib -DHAVE_CONFIG_H -o weeviterbi_test -L../squid -L../src weeviterbi_test.o -m32 -I/Users/kristerw/pbulk/scratch/biology/hmmer/work/.buildlink/include -lhmmer -lsquid -lm [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true [*] /Users/kristerw/pbulk/scratch/biology/hmmer/work/.tools/bin/true <.> true